1. N. Ch. Karayiannis, V.G. Mavrantzas, D.N. Theodorou, “Diffusion of small molecules in disordered media: study of the effect of kinetic and spatial heterogeneities”, Chem. Eng. Sci. 2001, 56, 2789-2801.
  2. E. Zervopoulou, V.G. Mavrantzas, D.N. Theodorou, “A new Monte Carlo simulation approach for the prediction of sorption equilibria of oligomers in polymer melts: Solubility of long alkanes in linear polyethylene”, J. Chem. Phys. 2001, 115, 2860-2875.
  3. I.-E. Mavrantza, D. Prentzas, V.G. Mavrantzas, C. Galiotis, “Detailed atomistic Molecular Dynamics simulation of the orthorhombic phase of polyethylene crystals and n-alkane paraffins with the COMPASS force field”, J. Chem. Phys. 2001, 115, 3937-3950.
  4. A. Uhlherr, V.G. Mavrantzas, M. Doxastakis, D.N. Theodorou, “Directed bridging methods for fast atomistic Monte Carlo simulations of bulk polymers”, Macromolecules 2001, 34, 8554-8568.
  5. M. Doxastakis, V.G. Mavrantzas, D.N. Theodorou, “Atomistic Monte Carlo simulation of cis-1,4 polyisoprene melts. I. Single temperature end-bridging Monte Carlo simulations”, J. Chem. Phys. 2001, 115, 11339-11351.
  6. M. Doxastakis, V.G. Mavrantzas, D.N. Theodorou, “Atomistic Monte Carlo simulation of cis-1,4 polyisoprene melts. II. Parallel-tempering end-bridging Monte Carlo simulations”, J. Chem. Phys. 2001, 115, 11352-11361.
  7. V. A. Harmandaris, M. Doxastakis, V.G. Mavrantzas, D.N. Theodorou, “Detailed molecular dynamics simulation of the self-diffusion of n-alkane and cis-1,4 polyisoprene oligomer melts”, J. Chem. Phys. 2002, 116, 436-446.
  8. V. G. Mavrantzas, H.C. Öttinger, “Atomistic Monte Carlo simulation of polymer melt elasticity: their nonequilibrium thermodynamics GENERIC formulation in a canonical ensemble”, Macromolecules 2002, 35, 960-975.
  9. M. V. Apostolakis, V.G. Mavrantzas, A.N. Beris, “Stress gradient-induced migration effects in the Taylor-Couette flow of a dilute polymer solution”, J. Non-Newt. Fluid Mech. 2002, 102, 409-445. (Invited paper for special issue in honor of Prof. Andreas Acrivos).
  10. A. Uhlherr, M. Doxastakis, V.G. Mavrantzas, D.N. Theodorou, S.J. Leak, N.E. Adam, P.E. Nyberg, “Atomic structure of a high polymer melt”, Europhys. Lett. 2002, 57, 506-511.
  11. N. Ch. Karayiannis, V.G. Mavrantzas, D.N. Theodorou, “A novel Monte Carlo scheme for the rapid equilibration of atomistic model polymer systems of precisely defined molecular architecture”, Phys. Rev. Lett. 2002, 88, 105503-1 105503-4.
  12. A. Uhlherr, S.J. Leak, N. Adam, P.E. Nyberg, M. Doxastakis, V.G. Mavrantzas, D.N. Theodorou, “Parallel, domain decomposition Monte Carlo for the fast simulation of large-scale bulk polymers”, Comp. Phys. Commun. 2002, 144, 1-22.
  13. V. A. Harmandaris, D. Angelopoulou, V.G. Mavrantzas, D.N. Theodorou, “Atomistic molecular dynamics simulation of diffusion in binary n-alkane/polyethylene melts”, J. Chem. Phys. 2002, 116, 7656-7665.
  14. K. Ch. Daoulas, A.F. Terzis, V.G. Mavrantzas, “Detailed atomistic Monte Carlo simulation of grafted polymer melts: I. Conformational and thermodynamic properties”, J. Chem. Phys. 2002, 116, 11028-11038.
  15. N. Ch. Karayiannis, A.E. Giannousaki, V.G. Mavrantzas, D.N. Theodorou, “Atomistic Monte Carlo simulation of strictly monodisperse long polyethylene melts through a generalized chain bridging algorithm”, J. Chem. Phys. 2002, 117, 5465-5479.
  16. K. Ch. Daoulas, V.G. Mavrantzas, D.J. Photinos, “Detailed atomistic Monte Carlo simulation of grafted polymer melts: II. Structural properties and NMR spectra”, J. Chem. Phys. 2002, 118, 1521-1532.
  17. N. Ch. Karayiannis, A.E. Giannousaki, V.G. Mavrantzas, “An advanced Monte Carlo method for the equilibration of model long-chain branched polymers with a well-defined molecular architecture: Detailed atomistic simulation of an H-shaped polyethylene melt”, J. Chem. Phys. 2003, 118, 2451-2454.
  18. V. A. Harmandaris, V.G. Mavrantzas, D.N. Theodorou, M. Kröger, J. Ramírez, H.C. Öttinger, D. Vlassopoulos, “Crossover from Rouse to entangled polymer melt regime: Signals from long, detailed atomistic molecular dynamics simulations, supported by rheological experiments”, Macromolecules 2003, 36, 1376-1387.
  19. K. Ch. Daoulas, A.F. Terzis, V.G. Mavrantzas, “Variable connectivity methods for the atomistic Monte Carlo simulation of inhomogeneous and/or anisotropic polymer systems of precisely defined chain length distribution: Tuning the spectrum of chain relative chemical potentials”, Macromolecules 2003, 36, 6674-6682.
  20. A. Eilmes, R.W. Munn, V.G. Mavrantzas, D.N. Theodorou, A. Góra, “Microscopic calculation of the static electric susceptibility of polyethylene”, J. Chem. Phys. 2003, 119, 11458-11466.
  21. N. Ch. Karayiannis, V.G. Mavrantzas, D.N. Theodorou, “Detailed atomistic simulation of the segmental dynamics and barrier properties of amorphous poly(ethylene terephthalate) and poly(ethylene isophthalate)”, Macromolecules 2004, 37, 2978-2995.
  22. K. Foteinopoulou, V.G. Mavrantzas, J. Tsamopoulos, “Numerical simulation of bubble growth in Newtonian and viscoelastic filaments undergoing stretching”, J. Non-Newt. Fluid Mech. 2004, 122, 177-200.
  23. G. Tsolou, V.G. MavrantzasD.N. Theodorou, “Detailed atomistic molecular dynamics simulation of cis-1,4-poly(butadiene)”, Macromolecules 2005, 38, 1478-1492.
  24. K. Ch. Daoulas, V.A. Harmandaris, V.G. Mavrantzas, “Detailed atomistic simulation of a polymer melt/solid interface: Structure, density and conformation of a thin film of polyethylene melt adsorbed on graphite”, Macromolecules 2005, 38, 5780-5795.
  25. V. A. Harmandaris, K.Ch. Daoulas, V.G. Mavrantzas, “Molecular dynamics simulation of a polymer melt/solid interface: Local dynamics and chain mobility in a thin film of polyethylene melt adsorbed on graphite”, Macromolecules 2005, 38, 5796-5809.
  26. K Ch. Daoulas, D.N. Theodorou, V.A. Harmandaris, N.Ch. Karayiannis, V.G. Mavrantzas, “Self-consistent-field study of compressible semiflexible melts adsorbed on a solid substrate and comparison with atomistic simulations”, Macromolecules 2005, 38, 7134-7149.
  27. N. Ch. Karayiannis, V.G. Mavrantzas“Hierarchical modelling of the dynamics of polymers with a non-linear molecular architecture: Calculation of branch point friction and chain reptation time of H-shaped polyethylene melts from long molecular dynamics simulations”, Macromolecules 2005, 38, 8583-8596.
  28. V. G. Mavrantzas, A.N. Beris, F. Leermakers, G. Fleer, “Continuum formulation of the Scheutjens-Fleer lattice statistical theory for homopolymer adsorption from solution”, J. Chem. Phys. 2005, 123, 174901-174915.
  29. G. Tsolou, V.A. Harmandaris, V.G. Mavrantzas, “Atomistic molecular dynamics simulation of the temperature and pressure dependence of local and terminal relaxation in cis-1,4-polybutadiene”, J. Chem. Phys. 2006, 124, 084906.
  30. K Foteinopoulou, V.G. Mavrantzas, Y. Dimakopoulos, J. Tsamopoulos, “Numerical simulation of multiple bubbles growing in a Newtonian liquid filament undergoing stretching”, Phys. of Fluids 2006, 18, 042106.
  31. G. Tsolou, V.A. Harmandaris, V.G. Mavrantzas, “Local structure and chain packing in cis-1,4-polybutadiene systems: Detailed atomistic molecular dynamics simulation of their temperature and pressure dependence”, Macromolecular Theory & Simulations 2006, 15, 381-393.
  32. K. Foteinopoulou, N.Ch. Karayiannis, V.G. Mavrantzas, M. Kröger, “Primitive path identification and entanglement statistics in polymer melts: Results from direct topological analysis on atomistic polyethylene models”, Macromolecules 2006, 39, 4207-4216.
  33. O. Alexiadis, V.A. Harmandaris, V.G. Mavrantzas, L. Delle Site, “Atomistic simulation of alkanethiol self-assembled monolayers on different metal surfaces via a quantum, first-principles parametrization of the sulfur-metal interaction”, J. Phys. Chem. C’ 2007, 111, 6380-6391.
  34. C. Baig, V.G. Mavrantzas, “Thermodynamically guided nonequilibrium Monte Carlo for generating realistic shear flows in polymeric systems”, Phys. Rev. Lett. 2007, 99, 257801.
  35. T. C. Ionescu, B.J. Edwards, D.J. Keffer, V.G. Mavrantzas, “Energetic and entropic elasticity of nonisothermal flowing polymers: Experiment, theory, and simulation ”, J. Rheol. 2008, 52, 105-140.
  36. O Alexiadis, K.Ch. Daoulas, V.G. Mavrantzas, “An efficient Monte Carlo algorithm for the fast equilibration and atomistic simulation of alkanethiol self-assembled monolayers on a Au(111) substrate”, J. Phys. Chem. B 2008, 112, 1198-1211.
  37. O. Alexiadis, V.G. Mavrantzas, R. Khare, J. Beckers, A.R.C. Baljon, “End-bridging Monte Carlo simulation of bulk and grafted amorphous polyethylene above and below the glass transition”, Macromolecules 2008, 41, 987-996.
  38. T. C. Ionescu, B.J. Edwards, D.J. Keffer, V.G. Mavrantzas, “Atomistic simulation of energetic and entropic elasticity in short-chain polyethylenes”, J. Rheol. 2008, 52, 567-589.
  39. G. Tsolou, V.A. Harmandaris, V.G. Mavrantzas, “Molecular dynamics simulation of temperature and pressure effects on the intermediate length scale dynamics and zero shear rate viscosity of cis-1,4-polybutadiene: Rouse mode analysis and dynamic structure factor spectra”, J. non-Newt. Fluid Mech. 2008, 152, 184–194.
  40. G. Tsolou, V.G. Mavrantzas, Z. Makrodimitri, I.G. Economou, R. Gani, “Atomistic simulation of the sorption of small gas molecules in polyisobutylene”, Macromolecules 2008, 41, 6228-6238.
  41. P. S. Stephanou, C. Baig, V.G. Mavrantzas, “A generalized differential constitutive equation for polymer melts based on principles of non-equilibrium thermodynamics”, J. Rheol. 2009, 53, 309-337.
  42. C. Baig, V.G. Mavrantzas, “Multiscale simulation of polymer melt viscoelasticity guided from non-equilibrium statistical thermodynamics: Atomistic Non-Equilibrium Molecular Dynamics coupled with Monte Carlo in an expanded statistical ensemble”, Phys. Rev. B 2009, 79, 144302.
  43. K. C. Satyanarayana, J. Abildskov, R. Gani, G. Tsolou, V.G. Mavrantzas, “Computer-aided polymer design using multi-scale modelling”, Brazilian J. Chem. Eng. 2010, 27, 369-380.
  44. P. S. Stephanou, C. Baig, G. Tsolou, V.G. Mavrantzas, M. Kröger, “Quantifying chain reptation in entangled polymer melts: Topological and dynamical mapping of atomistic simulation results onto the tube model”, J. Chem. Phys. 2010, 132, 124904.
  45. C. Baig, V.G. Mavrantzas, “Tension thickening, molecular shape, and flow birefringence of an H-shaped polymer melt in steady shear and planar extension”, J. Chem. Phys. 2010, 132, 014904.
  46. C. Baig, O. Alexiadis, V.G. Mavrantzas“Advanced Monte Carlo algorithm for the atomistic simulation of short- and long-chain branched polymers: Implementation for H-shaped, q-shaped, and short-chain branched polyethylene melts”, Macromolecules 2010, 43, 986–1002.
  47. C. Baig, V.G. Mavrantzas, M. Kröger, “Flow effects on melt structure and entanglement network of linear polymers: Results from a nonequilibrium molecular dynamics simulation study of a polyethylene melt in steady shear”, Macromolecules 2010, 43, 6886–6902.
  48. C. Baig, V.G. Mavrantzas, “From atomistic trajectories to primitive paths to tube models: Linking molecular simulations with the reptation theory for entangled polymer melts”, Soft Matter 2010, 6, 4603-4612.
  49. C. Baig, P.S. Stephanou, G. Tsolou, V.G. Mavrantzas, M. Kröger, “Understanding Dynamics in Binary Mixtures of Entangled cis-1,4-Polybutadiene Melts at the Level of Primitive Path Segments by Mapping Atomistic Simulation Data onto the Tube Model”, Macromolecules 2010, 43, 8239–8250.
  50. G. Tsolou, N. Stratikis, C. Baig, P.S. Stephanou, V.G. Mavrantzas. “Melt Structure and Dynamics of Unentangled Polyethylene Rings: Rouse Theory, Atomistic Molecular Dynamics Simulation, and Comparison with the Linear Analogues”, Macromolecules 2010, 43, 10692–10713.